Painel de Produção

Jeronimo Lameira Silva

lameira@ufpa.br

Link Lattes: http://lattes.cnpq.br/7711489635465954
Laboratório vinculado: -
Endereço do laboratório: -

Produção: Artigos (Últimos cinco anos)

1. Lameira, Jerônimo; KUPCHENCKO, ILYA ; WARSHEL, ARIEH . Enhancing Paradynamics for QM/MM Sampling of Enzymatic Reactions. Journal of Physical Chemistry. B, v. 120, p. 2155-2164, 2016.
FI = 3,302

2. MORAES, GLEICIANE LEAL ; GOMES, GUELBER CARDOSO ; MONTEIRO DE SOUSA, PAULO ROBSON ; ALVES, Cláudio Nahum ; Govender, Thavendran ; Kruger, Hendrik G. ; Maguire, Glenn E.M. ; LAMICHHANE, GYANU ; Lameira, Jerônimo . Structural and functional features of enzymes of Mycobacterium tuberculosis peptidoglycan biosynthesis as targets for drug development. Tuberculosis (Edinburgh), v. xx, p. xx, 2015.
FI = 2,711

3. Honarparvar, Bahareh ; PAWAR, SACHIN A ; ALVES, Cláudio Nahum ; Lameira, Jerônimo ; MAGUIRE, GLENN EM ; SILVA, JOSÉ ROGÉRIO A ; Govender, Thavendran ; KRUGER, HENDRIK G . Pentacycloundecane lactam vs lactone norstatine type protease HIV inhibitors: binding energy calculations and DFT study. Journal of Biomedical Science, v. 22, p. 15, 2015.
FI = 2,763

4. SILVA, JOSÉ ROGÉRIO A. ; BISHAI, WILLIAM R. ; Govender, Thavendran ; LAMICHHANE, GYANU ; Maguire, Glenn E.M. ; Kruger, Hendrik G. ; LAMEIRA, JERONIMO ; Alves, Cláudio N. . Targeting the cell wall of Mycobacterium tuberculosis: A molecular modelling investigation of the interaction of imipenem and meropenem with L , D -transpeptidase 2. Journal of Biomolecular Structure & Dynamics, v. 001, p. 1-34, 2015.
FI = 2,919

5. SILVA, JOSE ; LAMEIRA, JERONIMO ; ROITBERG, ADRIAN E ; ALVES, Cláudio Nahum . Simulating the Inhibition Reaction of Mycobacterium tuberculosis L,D-Transpeptidase 2 by Carbapenems. Chemical Communications (London. 1996. Print), v. x, p. x-x, 2015.
FI = 6,834

6. LOCKHAT, HUSAIN A. ; SILVA, JOSÉ R. A. ; Alves, Cláudio N. ; Govender, Thavendran ; Lameira, Jerônimo ; Maguire, Glenn E. M. ; Sayed, Yasien ; Kruger, Hendrik G. . Binding free energy calculations of nine FDA-approved protease inhibitors against HIV-1 subtype C I36T-T containing 100 amino acids per monomer. Chemical Biology & Drug Design (Print), v. xx, p. n/a-n/a, 2015.
FI = 2,485

7. FAKHAR, ZEYNAB ; NAIKER, SUHASHNI ; ALVEZ, CLAUDIO N. ; Govender, Thavendran ; Maguire, Glenn E. M. ; LAMEIRA, JERONIMO ; LAMICHHANE, GYANU ; Kruger, Hendrik G. ; Honarparvar, Bahareh . A Comparative Modeling and Molecular Docking Study on Targets Involved in Peptidoglycan Biosynthesis. Journal of Biomolecular Structure & Dynamics, v. xx, p. 1-42, 2015.
FI = 2,919

8. DA COSTA, KAUÊ SANTANA ; LEAL, ELCIO ; DOS SANTOS, ALBERTO MONTEIRO ; LIMA E LIMA, ANDERSON HENRIQUE ; ALVES, Cláudio Nahum ; Lameira, Jerônimo . Structural Analysis of Viral Infectivity Factor of HIV Type 1 and Its Interaction with A3G, EloC and EloB. Plos One, v. 9, p. e89116, 2014.
FI = 3,234

9. LIMA, CARLYLE ; SILVA, JOSÉ ; DE TÁSSIA CARVALHO CARDOSO, ÉRICA ; SILVA, EDILENE ; Lameira, Jerônimo ; DO NASCIMENTO, JOSÉ ; DO SOCORRO BARROS BRASIL, DAVI ; ALVES, CLÁUDIO . Combined Kinetic Studies and Computational Analysis on Kojic Acid Analogous as Tyrosinase Inhibitors. Molecules (Basel. Online), v. 19, p. 9591-9605, 2014.
FI = 2,416

10. SAMPAIO, LUCIA DE FATIMA SOBRAL ; MESQUITA, FELIPE PANTOJA ; DE SOUSA, PAULO ROBSON MONTEIRO ; SILVA, JERÔNIMO LAMEIRA ; ALVES, CLAUDIO NAHUM . The melatonin analog 5-MCA-NAT increases endogenous dopamine levels by binding NRH:quinone reductase enzyme in the developing chick retina. International Journal of Developmental Neuroscience, v. 38, p. 119-126, 2014.
FI = 2,58

11. LAMEIRA, JERONIMO; B, RAM PRASAD ; CHU, ZHEN T. ; WARSHEL, ARIEH . Methyltransferases do not work by compression, cratic, or desolvation effects, but by electrostatic preorganization. Proteins (Print), v. 83, p. n/a-n/a, 2014.
FI = 2,627

12. REIS, MAURO ; ALVES, Cláudio Nahum ; Lameira, Jerônimo ; TUÑÓN, IÑAKI ; MARTÍ, SERGIO ; Moliner, Vicent . The catalytic mechanism of glyceraldehyde 3-phosphate dehydrogenase from Trypanosoma cruzi elucidated via the QM/MM approach. PCCP. Physical Chemistry Chemical Physics (Print), v. 15, p. 3772, 2013.
FI = 4,493

13. SOUSA, PAULO ROBSON M. ; DE ALENCAR, NELSON ALBERTO N. ; Lima, Anderson H. ; Lameira, Jerônimo ; ALVES, Cláudio Nahum . Protein-Ligand Interaction Study of OGA in Complex with GlcNAcstatin. Chemical Biology & Drug Design (Print), v. 81, p. 284-290, 2013.
FI = 2,485

14. DA SILVA, RONALDO CORREIA ; DE ALENCAR, NELSON ALBERTO N. ; ALVES, Cláudio Nahum ; Lameira, Jerônimo . Analysis of the structure of calpain-10 and its interaction with the protease inhibitor SNJ-1715. Computers in Biology and Medicine, v. 43, p. 1334-1340, 2013.
FI = 1,24

15. DO NASCIMENTO, JOSENAIDE P. ; Araújo Silva, José Rogério ; Lameira, Jerônimo ; Alves, Cláudio N. . Metal-dependent inhibition of HIV-1 integrase by 5CITEP inhibitor: A theoretical QM/MM approach. Chemical Physics Letters (Print), v. 583, p. 175-179, 2013. FI = 1,897

16. DE FARIAS SILVA, NATÁLIA ; Lameira, Jerônimo ; ALVES, Cláudio Nahum ; MARTÍ, SERGIO . Computational study of the mechanism of half-reactions in class 1A dihydroorotate dehydrogenase from Trypanosoma cruzi. PCCP. Physical Chemistry Chemical Physics (Print), v. 15, p. 18863-18871, 2013.
FI = 4,493

17. B, R. P. ; PLOTNIKOV, N. V. ; LAMEIRA, J. ; WARSHEL, A. . Quantitative exploration of the molecular origin of the activation of GTPase. Proceedings of the National Academy of Sciences of the United States of America, v. xxx, p. 1-6, 2013.
FI = 9,674

18. Makatini, Maya M. ; Petzold, Katja ; ALVES, Cláudio Nahum ; Arvidsson, Per I. ; Honarparvar, Bahareh ; Govender, Patrick ; Govender, Thavendran ; Kruger, Hendrik G. ; Sayed, Yasien ; JerônimoLameira, ; Maguire, Glenn E.M. ; Soliman, Mahmoud E.S. . Synthesis, 2D-NMR and molecular modelling studies of pentacycloundecane lactam-peptides and peptoids as potential HIV-1 wild type C-SA protease inhibitors. Journal of Enzyme Inhibition and Medicinal Chemistry (Print), v. xxx, p. 1-12, 2012.
FI = 2,332

19. Guimarães, Luis C. ; Silva, Natália F. ; Miyoshi, Anderson ; Schneider, Maria P.C. ; Silva, Artur ; Azevedo, Vasco ; Brasil, Davi S.B. ; Lameira, Jerônimo ; Alves, Cláudio N. . Structure modeling of a metalloendopeptidase from Corynebacterium pseudotuberculosis. Computers in Biology and Medicine, v. xxx, p. xx-xx, 2012.
FI = 1,24

20. Lima, Anderson H. ; Souza, Paulo R. M. ; Alencar, Nelson ; Lameira, Jerônimo ; Govender, Thavendran ; Kruger, Hendrik G. ; Maguire, Glenn E. M. ; Alves, Cláudio N. . Molecular Modeling of T. rangeli, T. brucei gambiense, and T. evansi Sialidases in Complex with the DANA Inhibitor. Chemical Biology & Drug Design (Print), v. 80, p. 114-120, 2012.
FI = 2,485

21. Silvana de O. Silva ; Marivaldo J. C. Corrêa ; Heriberto R. Bitencourt ; Waldinei Rosa Monteiro ; J. Lameira ; Lourivaldo S. Santos ; Giselle Maria S. P. Guilhon ; Davi S. B. Brasil . Density Functional Theory Calculations of the Nuclear Magnetic Resonance Parameters for Dihydrochalcones. Journal of Computational and Theoretical Nanoscience, v. 9, p. 957-962, 2012.
FI = 1,343

22. Priscila P. B. Santana ; Rubens Ghilardi Junior ; Alves, Cláudio N. ; J. Lameira ; John Anthony McCulloch ; SCHNEIDER ,M. P. C. ; Silva, Artur . Diversity and three-dimensional structures of the alpha Mcrof the methanogenic Archaea from the anoxic region of Tucuruí Lake, in Eastern Brazilian Amazonia. Genetics and Molecular Biology (Impresso), v. 35, p. 126-133, 2012.
FI = 1,202

23. SILVA, J. R. A. ; ALVES, Claúdio N ; J. Lameira . Insights for Design of Trypanosoma cruzi GAPDH Inhibitors: A QM/MM MD Study of 1,3-Bisphospo-D-Glyceric Acid Analogs. International Journal of Quantum Chemistry, v. xxxxx, p. xxx-xxx, 2012.
FI = 1,432

24. ALENCAR, NELSON ALBERTO N. DE ; SOUSA, PAULO ROBSON M. ; SILVA, JOSÉ ROGÉRIO A. ; Lameira, Jerônimo ; ALVES, Cláudio Nahum ; MARTÍ, SERGIO ; Moliner, Vicent . Computational Analysis of Human OGA Structure in Complex with PUGNAc and NAG-Thiazoline Derivatives. Journal of Chemical Information and Modeling (Online), v. 52, p. 2775-2783, 2012.
FI = 3,738

25. Wagner S. Alencar. ; Elie Acayanka ; Eder C. Lima ; Betina Royer ; Felipr E. de Souza ; Lameira, Jerônimo ; Alves, Cláudio N. . Application of Mangifera indica (mango) seeds as a biosorbent for removal of Victazol Orange 3R dye from aqueous solution and study of the biosorption mechanism. Chemical Engineering Journal (1996), v. 209, p. 577-588, 2012.
FI = 4,321

26. Lima, Anderson Henrique ; Lameira, Jerônimo ; ALVES, Cláudio Nahum . Protein ligand interaction of T. cruzi trans-sialidase inhibitors: a docking and QM/MM MD study. Structural Chemistry, v. xxx, p. xxxx-xxx, 2011.
FI = 1,837

27. Carneiro, Agnaldo Silva ; Lameira, Jerônimo ; ALVES, Cláudio Nahum . A theoretical study of the molecular mechanism of the GAPDH Trypanosoma cruzi enzyme involving iodoacetate inhibitor. Chemical Physics Letters (Print), v. 514, p. 336-340, 2011.
FI = 1,897

28. Silva, Natália de Farias ; Alves, Cláudio Nahum ; J. Lameira . A quantum mechanical/molecular mechanical study of the aspartic protease plasmepsin IV complexed with allophenylnorstatine-based inhibitor. Chemical Physics Letters (Print), v. 509, p. 169-174, 2011.
FI = 1,897

29. Farias Silva, Natália ; Alves, Cláudio Nahum ; J. Lameira . Computational analysis of aspartic protease plasmepsin II complexed with EH58 inhibitor: a QM/MM MD study. Journal of Molecular Modeling, v. xxx, p. xxx-xxx, 2011.
FI = 1,736

30. J. Lameira; Alves, C. N. ; Tunon Inaki ; Marti?, Sergio ; Moliner, Vicent . Enzyme Molecular Mechanism as a Starting Point to Design New Inhibitors: A Theoretical Study of. Journal of Physical Chemistry. B, v. 115, p. 6764-6775, 2011.
FI = 3,302

31. Moraes, Gleiciane ; Azevedo, Vasco ; Costa, Marcí ; Miyoshi, Anderson ; Silva, Artur ; Silva, Vivian ; Oliveira, Diana ; Teixeira, Maria Fátima ; Alves, Cláudio Nahum ; J. Lameira . Homology modeling, molecular dynamics and QM/MM study of the regulatory protein PhoP from Corynebacterium pseudotuberculosis. Journal of Molecular Modeling, v. xxx, p. xxx-xx, 2011.
FI = 1,736

Produção: Projeto de Pesquisa (Conforme registros do ICB)

2014 - Atual
SIMULAÇÃO COMPUTACIONAL DE REAÇÕES CATALISADAS POR METILTRANSFERASES

2013 - Atual
Projeto de Cooperação Internacional em Nanobiotecnologia: Desenvolvimento de nanocarreadores cerâmicos de fármacos com atividades antiinflamatóra (indometacina e ibulprofeno)

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